News Blog

News Blog


Seeing beyond the diffraction limit in 3-D

PITTSBURGH—At a meeting of the American Physical Society (APS) here this past week, physical chemist W. E. Moerner of Stanford University presented a clever new trick for looking inside living cells. The technique allows views in three-dimensions and well beyond the so-called diffraction limit that ordinarily fuzzes up images at around half the wavelength of the light used. Moerner was this year's recipient of the APS's Irving Langmuir Prize in Physical Chemistry.

Techniques such as electron microscopy have long allowed exquisite imaging at the nanoscale, but they typically require careful preparation of the object to be imaged and are not practical for, say, looking inside living cells to see the processes taking place there. As physics students learn early on in optics, the best images usually obtainable using light can make out features no smaller than about half the light's wavelength, or about 200 nanometers using the shortest-wavelength visible light. (A nanometer is a billionth of a meter, or about 40 billionths of an inch.) Biochemical structures in cells are much smaller than that.

"Near-field" optical scanning pushes beyond the diffraction limit by placing a screen with a tiny window, or aperture, up against the object and scanning it across the object to build up an image. But this approach only succeeds at getting extra-high-resolution images of things very close behind the screen—things within the "near-field" range that is short enough that wave effects have not yet washed all of the finer details out of the light.

The first trick of the new imaging process is to image light from a single fluorescent molecule, or fluorophore. Such a light source has a size of around a single nanometer. The optical image of the fluorophore will still be a blob several hundred nanometers across, but with today's high-quality detection systems one can analyze the intensity of the blob and locate its central maximum with very high precision. Moerner compares it to looking down at a small, conical volcanic island. The island may be a few miles across, but one can analyze the topography and locate the mountain peak at the island's center down to tens of yards, say.

This trick is actually as old as Heisenberg, who in the 1920s noted that given n photons, one can locate an electron with a precision that goes roughly as one over root-n of the diffraction limit. Researchers later generalized the idea to other types of imaging.

That's all very well for getting single points very accurately—say, the location of a protein of interest, by tagging the protein with and then imaging the fluorophore—but it wouldn't be much use for looking at two nearby points each labeled with a fluorophore. The two "mountaintops" would be close together and difficult to separate.

So the second trick of the imaging method makes use of "photoswitching" of certain organic fluorophores. Such molecules may be photoactivated by one wavelength of light, then made to fluoresce with a second wavelength, and ultimately become photobleached, or switched off again. The researchers cannot control which fluorophores in a cell will be activated, but by sending in the correct amount of light they ensure a good probability that, even if a lot of fluorophores are in a small region, only isolated fluorophores are activated. They can then image those fluorophores until photobleaching occurs, repeating the trick often enough to build up a picture of all the fluorophores in the cell. Three separate groups independently proposed this trick in 2006.

Thus one can get a very high-resolution picture of where the tagged proteins or other nanoscopic objects are inside the living cell, and follow them over time through processes such as cell division. (Moerner in particular mentioned studying how a certain kind of bacteria that divides into two dissimilar daughter cells sends different proteins to each of its progeny.)

But this high-resolution picture is still a flat, two-dimensional image. The third trick of the imaging technique that Moerner described adds the third dimension. Recall the "mountain" again—the blob of light with a central peak in intensity. In technical terms it is a so-called point spread function—how the image of light from a tiny point source becomes spread out as it goes through the researchers' imaging system. The point spread function need not be a simple symmetrical mound like the idealized volcanic island. Instead it can be arranged to be more of a dumbbell shape. Furthermore, the function can "twist" around depending on the depth of the point source. Moerner calls this twisting dumbbell form a double-helix point spread function, for obvious reasons.

So: The fluorophores are randomly photoswitched to image them individually. The midpoint of the "dumbbell" for each one provides the fluorophore's precise position in the 2-D plane. And the orientation of the dumbbell places it in the third dimension—how far it is along the line of sight into the cell.

Imaging in three dimensions with a double-helix point spread function was demonstrated last year by Sri Rama Prasanna Pavani and Rafael Piestun of the University of Colorado at Boulder, but with fluorescent microspheres as the target—much larger and brighter than single molecules. Those two researchers, along with Moerner and collaborators, reported in the March 3 Proceedings of the National Academy of Sciences USA that they had extended the double-helix technique to image individual fluorophores in a thick polymer sample. They located the fluorophores to about 10 to 20 nanometers in all three dimensions over a depth of 2,000 nanometers. Now it falls to excited biologists to apply the technique to study actual cells.

Photo of W. E. Moerner: Stanford University

Tags: fluorescence, APS March meeting, Moerner, microscopy
More News Blog: Next: Rare star-to-supernova link established Previous: Drive to the airport, get clearance, and take off in your flying... car?

2 Comments

Add Comment
View
  1. 1. Mims 01:09 PM 3/23/09

    This is more or less identical to Nature's Method of the Year for 2008, 'Super Resolution Microscopy.'

    We did a video for them on it, here:

    http://www.nature.com/nmeth/video/moy2008/index.html

    Reply | Report Abuse | Link to this
  2. 2. geek93 11:43 PM 3/30/09

    The first part of the article introduces the 2006 work for sure. But the last three paragraphs describe the new 3D superresolution imaging based on a double-helix point spread function.

    Reply | Report Abuse | Link to this
Leave this field empty

Add a Comment

You must sign in or register as a ScientificAmerican.com member to submit a comment.
Click one of the buttons below to register using an existing Social Account.

More from Scientific American

See what we're tweeting about

Scientific American Editors

Tweets could not be retrieved at this time

Free Newsletters


Get the best from Scientific American in your inbox

Solve Innovation Challenges

Powered By: Innocentive

  SA Digital
  SA Digital

Email this Article

Seeing beyond the diffraction limit in 3-D: Scientific American Blog

X
Scientific American MIND iPad

Tap into your MIND

Get Both Print & Tablet Editions for one low price!

Subscribe Now >>

X

Please Log In

Forgot: Password

X

Account Linking

Welcome, . Do you have an existing ScientificAmerican.com account?

Yes, please link my existing account with for quick, secure access.



Forgot Password?

No, I would like to create a new account with my profile information.

Create Account
X

Report Abuse

Are you sure?

X

Institutional Access

It has been identified that the institution you are trying to access this article from has institutional site license access to Scientific American on nature.com. To access this article in its entirety through site license access, click below.

Site license access
X

Error

X

Share this Article

X

About the Bering in Mind Blog

In this column presented by Scientific American Mind magazine, research psychologist Jesse Bering of Queen's University Belfast ponders some of the more obscure aspects of everyday human behavior. Ever wonder why yawning is contagious, why we point with our index fingers instead of our thumbs or whether being breastfed as an infant influences your sexual preferences as an adult? Get a closer look at the latest data as "Bering in Mind" tackles these and other quirky questions about human nature. Sign up for the RSS feed or friend Dr. Bering on Facebook and never miss an installment again.

X

About the Cross-check Blog

Every week, John Horgan takes a puckish, provocative look at breaking science. A former staff writer at Scientific American, he is the author of several books—most notably, The End of Science: Facing the Limits of Knowledge in the Twilight of the Scientific Age. He currently directs the Center for Science Writings at Stevens Institute of Technology. He lives in New York State's Hudson Highlands, where he plays ice hockey each winter to hone his cross-checking skills.

X

Expeditions Blog

Ever wonder what it's really like to be working in Antarctica or collecting core samples from the middle of the Pacific Ocean? Get a first-hand feel for scientific exploration by following the blog posts of researchers out in the field.

X

About the Extinction Countdown Blog

Several times a week, John Platt shines a light on endangered species from all over the globe, exploring not just why they are dying out but also what's being done to rescue them from oblivion. From unusual or little-known organisms like the giant spitting earthworm and the stinking hawk's-beard to popular favorites like cheetahs and koalas, Platt, a journalist specializing in environmental issues and technology, does his part to slow the countdown.

X

About the Guest Blog

The editors of Scientific American regularly encounter perspectives on science and technology that we believe our readers would find thought-provoking, fascinating, debatable and challenging. The guest blog is a forum for such opinions. The views expressed belong to the author and are not necessarily shared by Scientific American.

X

About the Solar at Home Blog

Follow Scientific American editor George Musser as he installs--or tries to install--solar photovoltaic panels on the roof of his suburban New Jersey home. You'll learn the literal nuts and bolts of going green with the sun and get energy-saving tips even if you aren't putting up panels.

Write to us with tips or comments at blog@sciam.com and follow us on Twitter: http://twitter.com/sciam.

X