Mighty microbes might help clean up oil extraction and radioactive wastes

Join Our Community of Science Lovers!

This article was published in Scientific American’s former blog network and reflects the views of the author, not necessarily those of Scientific American



On supporting science journalism

If you're enjoying this article, consider supporting our award-winning journalism by subscribing. By purchasing a subscription you are helping to ensure the future of impactful stories about the discoveries and ideas shaping our world today.


There appears to be literally nothing microbes cannot do. From the invention of photosynthesis to lifecycles that require no sunlight—even surviving extreme radiation—the most extreme microbes thrive almost everywhere scientists look. And now microbiologists have added two more energy-related tricks to the microbial arsenal.

At the European Society for General Microbiology meeting this week, Richard Johnson and his fellow scientists from the University of Essex will present research showing that a mixed ecosystem of particular bacteria can survive—and clean up—one of the most lethal man-made environments: the residue from extracting petroleum from oil sands.

Extracting this heavy oil and refining it produces a slew of toxic waste, particularly water with naphthenic acid (one of the secret ingredients of napalm). In Athabasca region of Canada—home to much of the oil sands industry—there are at least one billion cubic meters of such polluted water sitting in local ponds.

What to do? Unleash bacteria, Johnson says. The microbes can break down the naphthenic acid into more benign byproducts in a few days rather than the decade or more it can take naturally. This can cut down on the environmental impact of producing oil from tar sands, of which there is an estimated 3.6 trillion barrels (double known conventional oil reserves).

It does not, however, address that other related byproduct: climate change caused by the greenhouse gases emitted when the oil is burned. Maybe microbes can help with that too (after all, they were responsible for the composition of the atmosphere until humans came along).

And it turns out E. coli—most famous for its role in food poisoning—does a pretty good job of cleaning up another potentially important but lethal energy source: radioactive waste. Lynne Macaskie and colleagues at the University of Birmingham show in another presentation at the same meeting how said E. coli, in conjunction with a cheap, widely available chemical (inositol phosphate), can recover uranium from the polluted waters of mines.

Basically, the E. coli break down the chemical and free the phosphate, which then bonds with the uranium and forms a precipitate on the exterior of the cell that can be harvested.

The researchers estimate that such recovered uranium would cost about 15 cents per gram of the nuclear fuel element. But it also offers an environmental protection advantage, removing radioactive material from the mine tailings. The process could even be used on spent fuel rods and other nuclear waste.

Image: Courtesy of USDA Agricultural Research Service / Photo by Eric Erbe, digital colorization by Christopher Pooley

It’s Time to Stand Up for Science

If you enjoyed this article, I’d like to ask for your support. Scientific American has served as an advocate for science and industry for 180 years, and right now may be the most critical moment in that two-century history.

I’ve been a Scientific American subscriber since I was 12 years old, and it helped shape the way I look at the world. SciAm always educates and delights me, and inspires a sense of awe for our vast, beautiful universe. I hope it does that for you, too.

If you subscribe to Scientific American, you help ensure that our coverage is centered on meaningful research and discovery; that we have the resources to report on the decisions that threaten labs across the U.S.; and that we support both budding and working scientists at a time when the value of science itself too often goes unrecognized.

In return, you get essential news, captivating podcasts, brilliant infographics, can't-miss newsletters, must-watch videos, challenging games, and the science world's best writing and reporting. You can even gift someone a subscription.

There has never been a more important time for us to stand up and show why science matters. I hope you’ll support us in that mission.

Thank you,

David M. Ewalt, Editor in Chief, Scientific American

Subscribe