Microbes Share Your Morning Metro Commute

An analysis of the Hong Kong metro found microbes, including some with antibiotic resistance genes, freshly disperse throughout the system each day. Christopher Intagliata reports. 

Illustration of a Bohr atom model spinning around the words Science Quickly with various science and medicine related icons around the text

Join Our Community of Science Lovers!

Every day, five million commuters ride the Hong Kong metro. Human commuters that is. Because there are countless more microbes riding the trains, too.

"Yes it seems they are also riding the metro to move around, without paying a ticket." Gianni Panagiotou is a systems biologist at the University of Hong Kong and the Hans Knoll Institute in Germany.

He and his team tracked the ebb and flow of microbes in the Hong Kong metro, by swabbing six volunteer commuters' palms as they commuted both day and night through the city's eight urban lines. 


On supporting science journalism

If you're enjoying this article, consider supporting our award-winning journalism by subscribing. By purchasing a subscription you are helping to ensure the future of impactful stories about the discoveries and ideas shaping our world today.


DNA sequencing revealed a lot of harmless skin and soil microbes—but also other germs that harbored antibiotic resistance genes. And while some trains had unique microbial fingerprints in the morning—an above-ground line running near a polluted river had more aquatic and sewage-related species, for example—by the evening commute, the microbial footprint of all lines was nearly the same. In other words, microbes wind up commuting too. 

The study is in the journal Cell Reports. [Kang Kang et al., The Environmental Exposures and Inner- and Intercity Traffic Flows of the Metro System May Contribute to the Skin Microbiome and Resistome]

The authors also hypothesize that cross contamination can occur between regions with different antibiotics use or guidelines. For example, tetracycline is common on mainland China's pig farms. And it was the line crossing into Hong Kong from mainland China that shuttled the most tetracycline resistance genes into the city each morning…where they dispersed throughout the entire system. 

Panagiotou says people shouldn't worry too much about it—it's not a serious health risk. "Having said that, it's a good idea to wash your hands after you're back at home.”

—Christopher Intagliata

[The above text is a transcript of this podcast.]

It’s Time to Stand Up for Science

If you enjoyed this article, I’d like to ask for your support. Scientific American has served as an advocate for science and industry for 180 years, and right now may be the most critical moment in that two-century history.

I’ve been a Scientific American subscriber since I was 12 years old, and it helped shape the way I look at the world. SciAm always educates and delights me, and inspires a sense of awe for our vast, beautiful universe. I hope it does that for you, too.

If you subscribe to Scientific American, you help ensure that our coverage is centered on meaningful research and discovery; that we have the resources to report on the decisions that threaten labs across the U.S.; and that we support both budding and working scientists at a time when the value of science itself too often goes unrecognized.

In return, you get essential news, captivating podcasts, brilliant infographics, can't-miss newsletters, must-watch videos, challenging games, and the science world's best writing and reporting. You can even gift someone a subscription.

There has never been a more important time for us to stand up and show why science matters. I hope you’ll support us in that mission.

Thank you,

David M. Ewalt, Editor in Chief, Scientific American

Subscribe